Software


IDEOM provides a user-friendly Excel interface for advanced metabolomics analysis of LC-MS (and GC-MS) data. 

To stay up-to-date, or to seek help for IDEOM please join the google-group: http://groups.google.com/group/ideom

The latest stable version of IDEOM can always be found at: http://sourceforge.net/projects/mzmatch/files/Ideom/
(the most recent beta version can be downloaded below. If using this version please report any bugs.)

If you have trouble getting a stable installation of the R dependencies (including mzMatch.R, xcms) please try copying this folder onto your computer (R.zip) and double-check you have the latest 64bit version of Java (https://java.com/en/download/manual.jsp). 


http://mzmatch.sourceforge.net/index.php
mzMatch.R provides advanced data processing algorithms for MS-based metabolomics:
mzMatch-ISO allows automated extraction of isotopologues for stable-isotope labelled metabolomics

Other useful software tools/downloads:
Pathos (pathway mapping tool): http://motif.gla.ac.uk/Pathos/
XCMS (LCMS peak extraction): http://metlin.scripps.edu/xcms/
Proteowizard tools (Includes msconvert for ms file format conversion):http://proteowizard.sourceforge.net/


ċ
IDEOM_v20gamma_CurrentVersion.xlsb
(12847k)
Darren Creek,
22 Apr 2015, 02:24
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